Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim30cD3YVI9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Mir877-201ENSMUST00000104738 85 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm4857-201ENSMUST00000192718 785 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim30cD3YVI9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm14363-201ENSMUST00000122304 409 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim30cD3YVI9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim30cD3YVI9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.9□□□□□ -0.35
Trim30cD3YVI9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trim30cD3YVI9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim30cD3YVI9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Gm9519-201ENSMUST00000206108 1337 ntBASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.89□□□□□ -0.35
Trim30cD3YVI9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms