Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.26□□□□□ -0.45
Scn1aA2APX8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn1aA2APX8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm25148-201ENSMUST00000104611 123 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm14395-201ENSMUST00000120494 563 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm13937-201ENSMUST00000121000 988 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Mir1956-201ENSMUST00000157748 65 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm23105-201ENSMUST00000083719 134 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm26047-201ENSMUST00000157308 113 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm26047-202ENSMUST00000198840 115 ntBASIC12.25□□□□□ -0.45
Scn1aA2APX8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn1aA2APX8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm2875-201ENSMUST00000211333 360 ntBASIC12.24□□□□□ -0.45
Scn1aA2APX8 Olfr584-201ENSMUST00000098210 964 ntBASIC12.24□□□□□ -0.45
Scn1aA2APX8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms