Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tubb3Q9ERD7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm9996-201ENSMUST00000070359 913 ntBASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tubb3Q9ERD7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tubb3Q9ERD7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm24934-201ENSMUST00000103764 111 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm14644-201ENSMUST00000116671 647 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm14247-201ENSMUST00000120950 237 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms