Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Gm44958-201ENSMUST00000203734 736 ntBASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm4768-201ENSMUST00000206199 686 ntBASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Spata33-207ENSMUST00000212760 4074 ntBASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.84□□□□□ -0.51
Sf3a3Q9D554 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sf3a3Q9D554 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sf3a3Q9D554 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sf3a3Q9D554 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm12502-201ENSMUST00000120197 444 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm37935-201ENSMUST00000192012 982 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm39404-201ENSMUST00000216350 313 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms