Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm13875-201ENSMUST00000120162 282 ntBASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm5706-201ENSMUST00000181525 993 ntBASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chaf1bQ9D0N7 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Chaf1bQ9D0N7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Gm15610-201ENSMUST00000120584 195 ntBASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Gm9794-201ENSMUST00000202370 423 ntBASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Chaf1bQ9D0N7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms