Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm26361-201ENSMUST00000158868 186 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm8956-201ENSMUST00000203939 825 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm11511-201ENSMUST00000118146 540 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm14441-201ENSMUST00000121960 540 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm43438-201ENSMUST00000198133 379 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Khdc3Q9CWU5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc3Q9CWU5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms