Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.01□□□□□ -0.33
Pcdh15Q99PJ1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm37160-201ENSMUST00000193081 1689 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm13281-201ENSMUST00000120871 567 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm22388-201ENSMUST00000158194 248 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm29164-201ENSMUST00000185454 1024 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm37688-201ENSMUST00000195195 465 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm12009-201ENSMUST00000121361 1100 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm45258-201ENSMUST00000210042 853 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Gm3926-201ENSMUST00000223378 1123 ntBASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh15Q99PJ1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm5278-201ENSMUST00000055957 552 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm10581-201ENSMUST00000097986 231 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdh15Q99PJ1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms