Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm12407-201ENSMUST00000180219 324 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm4654-201ENSMUST00000183305 982 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm6450-201ENSMUST00000200896 574 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm44506-201ENSMUST00000206278 965 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm11783-201ENSMUST00000119549 885 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm6485-201ENSMUST00000160676 439 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm21092-201ENSMUST00000178995 955 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm44980-201ENSMUST00000205826 314 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm45113-201ENSMUST00000207518 165 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm7940-201ENSMUST00000218195 769 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b1Q99NB9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Gm26047-201ENSMUST00000157308 113 ntBASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Gm3150-201ENSMUST00000166418 204 ntBASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Mir7076-201ENSMUST00000183519 74 ntBASIC12.49□□□□□ -0.41
Sf3b1Q99NB9 Mir8115-201ENSMUST00000184992 119 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms