Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf111Q99ML9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm11930-201ENSMUST00000117788 190 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm14381-201ENSMUST00000122105 414 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf111Q99ML9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms