Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm4157-201ENSMUST00000211647 679 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm11949-201ENSMUST00000117640 372 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm14724-201ENSMUST00000118400 537 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm16071-201ENSMUST00000119589 793 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Mir8115-201ENSMUST00000184992 119 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm17826-201ENSMUST00000189720 798 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.37□□□□□ -0.75
Scrt1Q99M85 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Scrt1Q99M85 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm12516-201ENSMUST00000120819 385 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms