Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm23270-201ENSMUST00000104055 131 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11222-201ENSMUST00000119005 738 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm5070-201ENSMUST00000177599 862 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm19187-201ENSMUST00000206781 892 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm18935-201ENSMUST00000212692 664 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdk5rap3Q99LM2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm18062-201ENSMUST00000208020 547 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm18055-201ENSMUST00000208254 547 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap3Q99LM2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms