Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm4294-201ENSMUST00000105169 614 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm12218-201ENSMUST00000117666 399 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm12791-201ENSMUST00000120788 655 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm11354-201ENSMUST00000121974 422 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm17825-201ENSMUST00000206836 794 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Gm7082-201ENSMUST00000209880 969 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.43□□□□□ -0.42
Clp1Q99LI9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clp1Q99LI9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm11500-201ENSMUST00000118237 601 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm7541-201ENSMUST00000118361 535 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm9673-201ENSMUST00000119287 781 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm12948-201ENSMUST00000119406 682 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm18201-201ENSMUST00000174735 875 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm28833-201ENSMUST00000189671 559 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm40332-201ENSMUST00000199847 938 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm43912-201ENSMUST00000204352 538 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm19640-201ENSMUST00000214849 464 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms