Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Mir877-201ENSMUST00000104738 85 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm13665-201ENSMUST00000120830 528 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.42□□□□□ -0.42
Usp11Q99K46 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm9230-201ENSMUST00000188228 532 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm38241-201ENSMUST00000192641 898 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Rprl1-202ENSMUST00000198476 238 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm19187-201ENSMUST00000206781 892 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm44651-201ENSMUST00000207343 372 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp11Q99K46 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Rgr-203ENSMUST00000225070 4704 ntBASIC12.41□□□□□ -0.42
Usp11Q99K46 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.41□□□□□ -0.42
Usp11Q99K46 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.41□□□□□ -0.42
Usp11Q99K46 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.41□□□□□ -0.42
Usp11Q99K46 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.41□□□□□ -0.42
Usp11Q99K46 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp11Q99K46 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp11Q99K46 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp11Q99K46 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usp11Q99K46 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp11Q99K46 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.4□□□□□ -0.42
Usp11Q99K46 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp11Q99K46 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp11Q99K46 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp11Q99K46 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms