Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.73□□□□□ -0.69
Lims1Q99JW4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lims1Q99JW4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm15547-201ENSMUST00000122152 333 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm5455-201ENSMUST00000058710 715 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lims1Q99JW4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.72□□□□□ -0.69
Lims1Q99JW4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lims1Q99JW4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.71□□□□□ -0.69
Lims1Q99JW4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Gm11222-201ENSMUST00000119005 738 ntBASIC10.71□□□□□ -0.69
Lims1Q99JW4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lims1Q99JW4 Gm20614-201ENSMUST00000177106 632 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms