Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smc1bQ920F6 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm4726-201ENSMUST00000135604 736 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm6019-201ENSMUST00000148369 736 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm42518-201ENSMUST00000196277 938 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm5455-201ENSMUST00000058710 715 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.65□□□□□ -0.22
Smc1bQ920F6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc1bQ920F6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smc1bQ920F6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Smc1bQ920F6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Smc1bQ920F6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm15703-201ENSMUST00000120250 880 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm6867-201ENSMUST00000219165 425 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.64□□□□□ -0.23
Smc1bQ920F6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smc1bQ920F6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms