Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb18Q91Y02 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Gm11451-201ENSMUST00000118946 630 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Gm5706-201ENSMUST00000181525 993 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Gm37299-201ENSMUST00000193951 826 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb18Q91Y02 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.33□□□□□ -0.43
Pcdhb18Q91Y02 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhb18Q91Y02 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Pcdhb18Q91Y02 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Pcdhb18Q91Y02 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm4654-201ENSMUST00000183305 982 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm38210-201ENSMUST00000191944 809 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm44980-201ENSMUST00000205826 314 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm6867-201ENSMUST00000219165 425 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb18Q91Y02 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms