Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm13350-201ENSMUST00000120519 479 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm27023-201ENSMUST00000182372 285 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm38214-201ENSMUST00000192581 988 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm37993-201ENSMUST00000195301 988 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 AC192616.1-201ENSMUST00000221922 132 ntBASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb20Q91XZ9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 AC125487.2-201ENSMUST00000219810 1300 ntBASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb20Q91XZ9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms