Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm37213-201ENSMUST00000193077 586 ntBASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb3Q91XZ7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb3Q91XZ7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Mir706-201ENSMUST00000102262 84 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm12291-201ENSMUST00000121627 311 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms