Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm12947-201ENSMUST00000116114 420 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm15636-201ENSMUST00000119205 668 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm20694-201ENSMUST00000176943 404 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm5254-201ENSMUST00000188353 977 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm43106-201ENSMUST00000199485 637 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
StrcQ8VIM6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.65□□□□□ -0.22
StrcQ8VIM6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
StrcQ8VIM6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
StrcQ8VIM6 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm5526-201ENSMUST00000153604 423 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm30055-201ENSMUST00000203175 803 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm13624-201ENSMUST00000120263 462 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm17936-201ENSMUST00000199413 988 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Gm10238-201ENSMUST00000089689 408 ntBASIC13.64□□□□□ -0.23
StrcQ8VIM6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
StrcQ8VIM6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
StrcQ8VIM6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm23132-201ENSMUST00000104254 132 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm12684-201ENSMUST00000118675 999 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm25288-201ENSMUST00000122800 265 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm6291-201ENSMUST00000179994 309 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm28671-201ENSMUST00000187036 692 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm18555-201ENSMUST00000197935 584 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.63□□□□□ -0.23
StrcQ8VIM6 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
StrcQ8VIM6 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms