Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm2965-201ENSMUST00000198365 343 ntBASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm4482-201ENSMUST00000200876 742 ntBASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm5369-201ENSMUST00000217499 588 ntBASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rprd1aQ8VDS4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm24891-201ENSMUST00000104391 136 ntBASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm12566-201ENSMUST00000121479 359 ntBASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm23085-201ENSMUST00000157849 293 ntBASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rprd1aQ8VDS4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rprd1aQ8VDS4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rprd1aQ8VDS4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms