Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm5035-201ENSMUST00000215581 927 ntBASIC9.58□□□□□ -0.88
Nup35Q8R4R6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Erich3-203ENSMUST00000189969 3460 ntBASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nup35Q8R4R6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gm25261-201ENSMUST00000157416 134 ntBASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gm9192-201ENSMUST00000183221 985 ntBASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup35Q8R4R6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.56□□□□□ -0.88
Nup35Q8R4R6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms