Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm9192-201ENSMUST00000183221 985 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Mir7051-201ENSMUST00000184167 73 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm29808-201ENSMUST00000194419 468 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm42660-201ENSMUST00000197733 947 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm8234-201ENSMUST00000198523 1107 ntBASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx54Q8K4L0 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm16219-201ENSMUST00000120096 274 ntBASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm33707-201ENSMUST00000195135 569 ntBASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx54Q8K4L0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx54Q8K4L0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm16305-201ENSMUST00000140747 556 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm4868-201ENSMUST00000164138 789 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm9372-201ENSMUST00000168454 430 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm6612-201ENSMUST00000170777 395 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm23694-201ENSMUST00000179335 110 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm29304-201ENSMUST00000186555 695 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm29223-201ENSMUST00000188867 695 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm37921-201ENSMUST00000194333 695 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm4903-201ENSMUST00000210462 405 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 AC152169.1-201ENSMUST00000223901 701 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 AC137871.1-201ENSMUST00000228278 475 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms