Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm11700-201ENSMUST00000119409 403 ntBASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm12196-201ENSMUST00000120954 262 ntBASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm25881-201ENSMUST00000157783 103 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm28937-201ENSMUST00000185413 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm29400-201ENSMUST00000187208 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm28662-201ENSMUST00000188446 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm28251-201ENSMUST00000188835 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm37318-201ENSMUST00000194325 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm38017-201ENSMUST00000194768 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rtn1Q8K0T0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtn1Q8K0T0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms