Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm15432-201ENSMUST00000121106 195 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm5616-201ENSMUST00000165252 384 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm8741-201ENSMUST00000174736 384 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm18711-201ENSMUST00000199341 750 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm12036-201ENSMUST00000120008 530 ntBASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm19459-201ENSMUST00000176240 835 ntBASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm44545-201ENSMUST00000208262 746 ntBASIC13.73□□□□□ -0.21
Vps53Q8CCB4 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps53Q8CCB4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.72□□□□□ -0.21
Vps53Q8CCB4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps53Q8CCB4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms