Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm7504-201ENSMUST00000201449 424 ntBASIC13.62□□□□□ -0.23
Shisa4Q8CA71 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Shisa4Q8CA71 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.62□□□□□ -0.23
Shisa4Q8CA71 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm11500-201ENSMUST00000118237 601 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm9358-201ENSMUST00000183067 927 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm37458-201ENSMUST00000194055 410 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm37905-201ENSMUST00000195310 341 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Shisa4Q8CA71 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm25148-201ENSMUST00000104611 123 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm11949-201ENSMUST00000117640 372 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm4726-201ENSMUST00000135604 736 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm6019-201ENSMUST00000148369 736 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm44506-201ENSMUST00000206278 965 ntBASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Shisa4Q8CA71 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Shisa4Q8CA71 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.59□□□□□ -0.23
Shisa4Q8CA71 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms