Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Uba3Q8C878 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm14058-201ENSMUST00000116082 735 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm18734-201ENSMUST00000172937 808 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm28937-201ENSMUST00000185413 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm29400-201ENSMUST00000187208 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm28662-201ENSMUST00000188446 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm28251-201ENSMUST00000188835 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm37318-201ENSMUST00000194325 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm38017-201ENSMUST00000194768 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm37287-201ENSMUST00000195449 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm37793-201ENSMUST00000195548 695 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gm5369-201ENSMUST00000217499 588 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.39□□□□□ -0.43
Uba3Q8C878 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Uba3Q8C878 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Uba3Q8C878 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm14724-201ENSMUST00000118400 537 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm11960-201ENSMUST00000122068 925 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Uba3Q8C878 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm37246-201ENSMUST00000192665 835 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm7848-201ENSMUST00000210739 718 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Uba3Q8C878 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.38□□□□□ -0.43
Uba3Q8C878 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.38□□□□□ -0.43
Uba3Q8C878 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Uba3Q8C878 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Uba3Q8C878 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Uba3Q8C878 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Uba3Q8C878 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms