Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Gm13809-201ENSMUST00000117921 597 ntBASIC13.74□□□□□ -0.21
Usp44Q8C2S0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Mir5120-201ENSMUST00000175020 78 ntBASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Gm37835-201ENSMUST00000193305 361 ntBASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp44Q8C2S0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm22711-201ENSMUST00000116890 133 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Paupar-201ENSMUST00000194826 3482 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms