Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm14193-201ENSMUST00000105067 153 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm26047-201ENSMUST00000157308 113 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm26047-202ENSMUST00000198840 115 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm44100-201ENSMUST00000204329 436 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm6108-201ENSMUST00000208365 367 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup54Q8BTS4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm13611-201ENSMUST00000118269 318 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm10807-201ENSMUST00000177134 795 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms