Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm27701-201ENSMUST00000184498 110 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm28911-201ENSMUST00000188837 117 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm18304-201ENSMUST00000189162 546 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Smco3Q8BQM7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm24830-201ENSMUST00000102024 166 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm23119-201ENSMUST00000158610 140 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm7287-201ENSMUST00000205267 602 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gm26232-201ENSMUST00000083360 166 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smco3Q8BQM7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.66□□□□□ -0.86
Smco3Q8BQM7 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms