Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm7985-201ENSMUST00000183329 981 ntBASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm7238-201ENSMUST00000206467 973 ntBASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm9244-201ENSMUST00000056767 2129 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm33366-201ENSMUST00000195583 3827 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm25343-201ENSMUST00000157460 107 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm3329-201ENSMUST00000159873 556 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm6606-201ENSMUST00000193613 947 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 CT010480.2-201ENSMUST00000225424 737 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Gm45416-201ENSMUST00000209713 2201 ntBASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col16a1Q8BLX7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm23255-201ENSMUST00000102244 110 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm7939-201ENSMUST00000201233 1050 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 BC080696-201ENSMUST00000202858 1218 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm37651-201ENSMUST00000194679 1494 ntBASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col16a1Q8BLX7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms