Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm27627-201ENSMUST00000183644 150 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm29615-201ENSMUST00000185371 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28224-201ENSMUST00000186078 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm29001-201ENSMUST00000186177 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28292-201ENSMUST00000186593 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28101-201ENSMUST00000187608 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm29076-201ENSMUST00000187689 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28302-201ENSMUST00000187931 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28646-201ENSMUST00000188220 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28205-201ENSMUST00000189177 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm29032-201ENSMUST00000189797 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm28695-201ENSMUST00000190300 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm37448-201ENSMUST00000192795 697 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm42997-202ENSMUST00000200321 985 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Depdc1bQ8BH88 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm37666-201ENSMUST00000194110 866 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm7003-201ENSMUST00000195089 312 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 AY036118-201ENSMUST00000200021 923 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Depdc1bQ8BH88 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Depdc1bQ8BH88 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.79□□□□□ -0.36
Depdc1bQ8BH88 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms