Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.76□□□□□ -0.53
Rpp38Q80UU2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm12501-201ENSMUST00000119163 529 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm14277-201ENSMUST00000121195 360 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm5733-201ENSMUST00000190232 939 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm10288-201ENSMUST00000084614 537 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpp38Q80UU2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm12997-201ENSMUST00000120207 640 ntBASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm13263-201ENSMUST00000121271 838 ntBASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm18734-201ENSMUST00000172937 808 ntBASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Mir433-201ENSMUST00000093564 124 ntBASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms