Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Gm44124-201ENSMUST00000204159 472 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 Gm9463-201ENSMUST00000206707 601 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.01□□□□□ -0.65
Pif1Q80SX8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pif1Q80SX8 Gm44942-201ENSMUST00000096093 2072 ntBASIC11□□□□□ -0.65
Pif1Q80SX8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pif1Q80SX8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm12164-201ENSMUST00000121695 551 ntBASIC11□□□□□ -0.65
Pif1Q80SX8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11□□□□□ -0.65
Pif1Q80SX8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11□□□□□ -0.65
Pif1Q80SX8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm45575-201ENSMUST00000210283 548 ntBASIC11□□□□□ -0.65
Pif1Q80SX8 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11□□□□□ -0.65
Pif1Q80SX8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm37145-201ENSMUST00000193540 2756 ntBASIC11□□□□□ -0.65
Pif1Q80SX8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm21998-201ENSMUST00000117552 1308 ntBASIC11□□□□□ -0.65
Pif1Q80SX8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pif1Q80SX8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pif1Q80SX8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 AC123619.1-203ENSMUST00000225276 2757 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm14585-201ENSMUST00000120713 634 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm11660-201ENSMUST00000120955 412 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm7666-201ENSMUST00000146631 819 ntBASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Pif1Q80SX8 Gm9358-201ENSMUST00000183067 927 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms