Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.59□□□□□ -0.55
Scaf4Q6PFF0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.55
Scaf4Q6PFF0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Scaf4Q6PFF0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm5950-201ENSMUST00000213337 772 ntBASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Btrc-209ENSMUST00000224478 2194 ntBASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms