Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NipblQ6KCD5 Gm6655-201ENSMUST00000201932 1309 ntBASIC8.98□□□□□ -0.97
NipblQ6KCD5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm42748-201ENSMUST00000199354 2341 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm11996-201ENSMUST00000117538 915 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm16184-201ENSMUST00000162324 573 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm3150-201ENSMUST00000166418 204 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm9034-201ENSMUST00000182071 1005 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm7940-201ENSMUST00000218195 769 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 AC121960.1-201ENSMUST00000227982 564 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm2238-201ENSMUST00000192074 3669 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Map1b-203ENSMUST00000223725 2669 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm7701-201ENSMUST00000163185 1479 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm30671-201ENSMUST00000214898 318 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Gm9791-201ENSMUST00000060997 447 ntBASIC8.97□□□□□ -0.97
NipblQ6KCD5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NipblQ6KCD5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm15625-201ENSMUST00000117617 1093 ntBASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm29543-201ENSMUST00000188138 967 ntBASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
NipblQ6KCD5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm45643-201ENSMUST00000211364 1484 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Mir1905-201ENSMUST00000122779 82 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm6216-201ENSMUST00000182390 687 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm38117-201ENSMUST00000194653 939 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm45113-201ENSMUST00000207518 165 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm18042-201ENSMUST00000219887 790 ntBASIC8.96□□□□□ -0.98
NipblQ6KCD5 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
NipblQ6KCD5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms