Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13□□□□□ -0.33
Krt39Q6IFX4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
Krt39Q6IFX4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Cts7-204ENSMUST00000225321 1257 ntBASIC13□□□□□ -0.33
Krt39Q6IFX4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Krt39Q6IFX4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Krt39Q6IFX4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Krt39Q6IFX4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm12015-201ENSMUST00000117065 843 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm11222-201ENSMUST00000119005 738 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm38341-201ENSMUST00000195357 515 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms