Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Gm4903-201ENSMUST00000210462 405 ntBASIC13.62□□□□□ -0.23
Scn9aQ62205 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scn9aQ62205 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scn9aQ62205 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Snord23-201ENSMUST00000116828 109 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm9625-201ENSMUST00000180422 955 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm45310-201ENSMUST00000210436 275 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 AC152169.1-201ENSMUST00000223901 701 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm10580-201ENSMUST00000097985 396 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm10582-201ENSMUST00000097987 396 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm10583-201ENSMUST00000097988 396 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn9aQ62205 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn9aQ62205 Gm42432-201ENSMUST00000197902 1617 ntBASIC13.61□□□□□ -0.23
Scn9aQ62205 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm15136-201ENSMUST00000120552 533 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm13827-201ENSMUST00000148801 372 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Scn9aQ62205 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Mir6953-201ENSMUST00000184745 68 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm29067-201ENSMUST00000190821 470 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm42660-201ENSMUST00000197733 947 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms