Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm13916-201ENSMUST00000117368 628 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm14263-201ENSMUST00000117955 746 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm8731-201ENSMUST00000118088 412 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm22334-201ENSMUST00000158070 133 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ctr9Q62018 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm15566-201ENSMUST00000121130 590 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.9□□□□□ -0.18
Ctr9Q62018 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm6114-201ENSMUST00000182472 968 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm28937-201ENSMUST00000185413 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm29400-201ENSMUST00000187208 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm28662-201ENSMUST00000188446 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm28251-201ENSMUST00000188835 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm37318-201ENSMUST00000194325 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm38017-201ENSMUST00000194768 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm37287-201ENSMUST00000195449 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm37793-201ENSMUST00000195548 695 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.9□□□□□ -0.18
Ctr9Q62018 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.9□□□□□ -0.18
Ctr9Q62018 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ctr9Q62018 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ctr9Q62018 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.9□□□□□ -0.19
Ctr9Q62018 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ctr9Q62018 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ctr9Q62018 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.9□□□□□ -0.19
Ctr9Q62018 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms