Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Gm23251-201ENSMUST00000103773 110 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.86□□□□□ -0.51
Six4Q61321 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.86□□□□□ -0.51
Six4Q61321 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.86□□□□□ -0.51
Six4Q61321 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.86□□□□□ -0.51
Six4Q61321 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.86□□□□□ -0.51
Six4Q61321 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Gm9555-201ENSMUST00000200908 583 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Lect2-202ENSMUST00000225183 823 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.86□□□□□ -0.51
Six4Q61321 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.86□□□□□ -0.51
Six4Q61321 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Six4Q61321 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Six4Q61321 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Six4Q61321 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.85□□□□□ -0.51
Six4Q61321 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Six4Q61321 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.85□□□□□ -0.51
Six4Q61321 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Six4Q61321 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Six4Q61321 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.85□□□□□ -0.51
Six4Q61321 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.85□□□□□ -0.51
Six4Q61321 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.85□□□□□ -0.51
Six4Q61321 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Six4Q61321 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.85□□□□□ -0.51
Six4Q61321 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.85□□□□□ -0.51
Six4Q61321 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Six4Q61321 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Six4Q61321 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Six4Q61321 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.84□□□□□ -0.51
Six4Q61321 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Six4Q61321 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Gm24891-201ENSMUST00000104391 136 ntBASIC11.84□□□□□ -0.51
Six4Q61321 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Gm11941-201ENSMUST00000119904 610 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms