Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm37284-201ENSMUST00000193607 539 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm20495-201ENSMUST00000173902 235 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Gm19918-201ENSMUST00000194858 400 ntBASIC11.31□□□□□ -0.6
Col12a1Q60847 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col12a1Q60847 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Col12a1Q60847 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col12a1Q60847 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col12a1Q60847 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.3□□□□□ -0.6
Col12a1Q60847 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm14633-201ENSMUST00000121152 470 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm24140-201ENSMUST00000122773 326 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm7727-201ENSMUST00000219830 671 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm8618-201ENSMUST00000097570 432 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms