Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.13□□□□□ -0.63
Tnfaip3Q60769 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm23251-201ENSMUST00000103773 110 ntBASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm8815-201ENSMUST00000173809 620 ntBASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm1821-202ENSMUST00000227415 750 ntBASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfaip3Q60769 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm15207-201ENSMUST00000119259 442 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm13461-201ENSMUST00000120980 662 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm8199-201ENSMUST00000121323 823 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfaip3Q60769 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms