Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm15573-201ENSMUST00000119487 540 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm22144-201ENSMUST00000157402 102 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm18367-201ENSMUST00000176139 600 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm9211-201ENSMUST00000182882 975 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm43947-201ENSMUST00000203019 959 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm8959-201ENSMUST00000213150 571 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps54Q5SPW0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm11956-201ENSMUST00000119525 512 ntBASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.1□□□□□ -0.15
Vps54Q5SPW0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps54Q5SPW0 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Mir1943-201ENSMUST00000158276 73 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm24844-201ENSMUST00000158679 127 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm3150-201ENSMUST00000166418 204 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm29499-201ENSMUST00000189151 486 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm28329-201ENSMUST00000191208 689 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm29171-201ENSMUST00000191397 486 ntBASIC14.09□□□□□ -0.15
Vps54Q5SPW0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps54Q5SPW0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms