Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms