Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.22□□□□□ -0.29
Srrm1Q52KI8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Srrm1Q52KI8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Mir671-201ENSMUST00000102432 98 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm13351-201ENSMUST00000118087 414 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm11783-201ENSMUST00000119549 885 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm7719-201ENSMUST00000182374 975 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm44647-201ENSMUST00000207402 428 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm17931-201ENSMUST00000208132 634 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Srrm1Q52KI8 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.21□□□□□ -0.3
Srrm1Q52KI8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm13019-201ENSMUST00000120000 276 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm10169-201ENSMUST00000121822 348 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm5706-201ENSMUST00000181525 993 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm44882-201ENSMUST00000205702 802 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Gm2553-201ENSMUST00000215986 605 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Srrm1Q52KI8 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms