Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rc3h1Q4VGL6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm14460-201ENSMUST00000121511 639 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm37299-201ENSMUST00000193951 826 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm44506-201ENSMUST00000206278 965 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rc3h1Q4VGL6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm16071-201ENSMUST00000119589 793 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm23045-201ENSMUST00000175041 96 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm17826-201ENSMUST00000189720 798 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rc3h1Q4VGL6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rc3h1Q4VGL6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms