Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nhlrc4Q3UP44 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nhlrc4Q3UP44 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nhlrc4Q3UP44 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm15595-201ENSMUST00000120840 961 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm23085-201ENSMUST00000157849 293 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm37246-201ENSMUST00000192665 835 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Gm43002-201ENSMUST00000200310 155 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nhlrc4Q3UP44 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm13263-201ENSMUST00000121271 838 ntBASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nhlrc4Q3UP44 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.78□□□□□ -0.68
Nhlrc4Q3UP44 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms