Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Spg11Q3UHA3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm23912-201ENSMUST00000104687 87 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm15549-201ENSMUST00000121595 622 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm42751-201ENSMUST00000198065 559 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm36980-201ENSMUST00000195643 622 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm5278-201ENSMUST00000055957 552 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Spg11Q3UHA3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm29548-201ENSMUST00000187012 694 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm28105-201ENSMUST00000187788 694 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm15636-201ENSMUST00000119205 668 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm14699-201ENSMUST00000122340 228 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Mir7051-201ENSMUST00000184167 73 ntBASIC10.78□□□□□ -0.68
Spg11Q3UHA3 Gm42908-201ENSMUST00000197508 870 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms