Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Brf2Q3UAW9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Brf2Q3UAW9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Brf2Q3UAW9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm13350-201ENSMUST00000120519 479 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm25668-201ENSMUST00000157700 129 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm25890-201ENSMUST00000177643 165 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm22614-201ENSMUST00000178300 165 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm37259-201ENSMUST00000193903 849 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm22042-201ENSMUST00000082989 165 ntBASIC11.08□□□□□ -0.64
Brf2Q3UAW9 Gm26110-201ENSMUST00000083971 165 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms