Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm9823-201ENSMUST00000051212 327 ntBASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim43aQ3TL54 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm13297-201ENSMUST00000120205 934 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm14832-201ENSMUST00000121289 322 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm24845-201ENSMUST00000158034 109 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm37489-201ENSMUST00000191883 159 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm18893-201ENSMUST00000198416 943 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm43822-201ENSMUST00000200285 476 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim43aQ3TL54 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm11222-201ENSMUST00000119005 738 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm11960-201ENSMUST00000122068 925 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms