Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Mir1249-201ENSMUST00000116791 98 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Mir1941-201ENSMUST00000157834 83 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm6216-201ENSMUST00000182390 687 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm9353-201ENSMUST00000200472 604 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 AC154407.1-201ENSMUST00000226777 526 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Gm6478-201ENSMUST00000099450 742 ntBASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trpm1Q2TV84 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trpm1Q2TV84 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC16.33■□□□□ 0.2
Trpm1Q2TV84 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm7765-201ENSMUST00000182585 974 ntBASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm7445-201ENSMUST00000192115 340 ntBASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.33■□□□□ 0.2
Trpm1Q2TV84 AC107763.1-201ENSMUST00000226082 1365 ntBASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trpm1Q2TV84 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm14005-209ENSMUST00000224993 1832 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 CT010447.1-201ENSMUST00000225657 1608 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm13192-201ENSMUST00000101199 208 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm10443-201ENSMUST00000119024 210 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm6441-201ENSMUST00000120983 696 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm11952-201ENSMUST00000121172 821 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm27316-201ENSMUST00000184884 277 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm19918-201ENSMUST00000194858 400 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm20568-201ENSMUST00000197129 208 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 AC174797.2-201ENSMUST00000225835 165 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms